| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 5213 |
| Atlantic Ocean | Sea/Bay/Gulf | native | 39156 |
| Atulayan Bay | Sea/Bay/Gulf | native | 41469 |
| Benguela Current | Sea/Bay/Gulf | native | 4472 |
| Bermuda | Sea/Bay/Gulf | native | 7251 |
| Canary Current | Sea/Bay/Gulf | native | 4472 |
| Cape Verde | Sea/Bay/Gulf | native | 94080 |
| Caribbean Sea | Sea/Bay/Gulf | native | 37039 |
| Chilika Lake/Lagoon | Lagoon | native | 95460 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 7300 |
| East Brazil Shelf | Sea/Bay/Gulf | native | 13608 |
| East Central Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| East China Sea | Sea/Bay/Gulf | native | 47843 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 48497 |
| Guinea Current | Sea/Bay/Gulf | native | 4472 |
| Gulf of Aqaba | Sea/Bay/Gulf | native | 58021 |
| Gulf of Mexico | Sea/Bay/Gulf | native | 37039 |
| Indian Ocean | Sea/Bay/Gulf | native | 4472 |
| Indonesian Sea | Sea/Bay/Gulf | native | 5978 |
| Insular Pacific-Hawaiian | Sea/Bay/Gulf | native | 583 |
| Kuroshio Current | Sea/Bay/Gulf | native | 559 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| New Zealand Shelf | Sea/Bay/Gulf | native | 5755 |
| North Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| North Brazil Shelf | Sea/Bay/Gulf | native | 13608 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Northeast U.S. Continental Shelf | Sea/Bay/Gulf | native | 7251 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Ormoc Bay | Sea/Bay/Gulf | native | 45205 |
| Pacific Central-American Coastal | Sea/Bay/Gulf | native | 13613 |
| Pacific Ocean | Sea/Bay/Gulf | native | 5512 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| Persian Gulf | Sea/Bay/Gulf | native | 68964 |
| Red Sea | Sea/Bay/Gulf | native | 84159 |
| Samar Sea | Sea/Bay/Gulf | native | 43018 |
| San Miguel Bay | Sea/Bay/Gulf | native | 45161 |
| Sikao Creek | River (basin) | native | 52823 |
| Sorsogon Bay | Sea/Bay/Gulf | native | 47531 |
| South Brazil Shelf | Sea/Bay/Gulf | native | 13608 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southeast U.S. Continental Shelf | Sea/Bay/Gulf | native | 7251 |
| Tasman Sea | Sea/Bay/Gulf | native | 7300 |
| Tayabas Bay | Sea/Bay/Gulf | native | 47573 |
| Tung-hsiao | Sea/Bay/Gulf | native | 43510 |
| Visayan Sea | Sea/Bay/Gulf | native | 3557 |
| Yellow Sea | Sea/Bay/Gulf | native | 4868 |