| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Arabian Sea | Sea/Bay/Gulf | native | 2872 |
| Chiku River | River (basin) | native | 36073 |
| Chilika Lake/Lagoon | Lagoon | native | 29108 |
| East China Sea | Sea/Bay/Gulf | native | 7238 |
| Gulf of Aqaba | Sea/Bay/Gulf | native | 58021 |
| Gulf of Oman | Sea/Bay/Gulf | native | 47533 |
| Gulf of Thailand | Sea/Bay/Gulf | native | 1632 |
| Indian Ocean | Sea/Bay/Gulf | native | 7238 |
| Indonesian Sea | Sea/Bay/Gulf | native | 5978 |
| Lagonoy Gulf | Sea/Bay/Gulf | native | 43283 |
| Lingayen Gulf | Sea/Bay/Gulf | native | 43020 |
| Mediterranean Sea | Sea/Bay/Gulf | introduced | 6724 |
| North Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Pacific Ocean | Sea/Bay/Gulf | native | 7300 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| Persian Gulf | Sea/Bay/Gulf | native | 11441 |
| Red Sea | Sea/Bay/Gulf | native | 84159 |
| Ruerhmen River | River (basin) | native | 36073 |
| Samar Sea | Sea/Bay/Gulf | native | 29039 |
| San Miguel Bay | Sea/Bay/Gulf | native | 43275 |
| Sea of Japan | Sea/Bay/Gulf | native | 559 |
| Shiliao River | River (basin) | native | 36073 |
| Sorsogon Bay | Sea/Bay/Gulf | native | 47531 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| South West Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 4735 |
| Tsengwen River | River (basin) | native | 36073 |
| Visayan Sea | Sea/Bay/Gulf | native | 110387 |
| West Central Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Yellow Sea | Sea/Bay/Gulf | native | 5193 |